Showing : copy number • reset
0
votes
0
replies
949
views
cn.MOPS output - mean/median of what?
cn.MOPS CNV copy number
5.2 years ago liorglic ▴ 10
0
votes
1
reply
1.8k
views
how to analyze CNV data
copy number
7.8 years ago mms140130 • 0
0
votes
0
replies
933
views
How to combine CGHcall objects
cghcall r cgh copy number
7.9 years ago kitcurtius • 0
1
vote
1
reply
1.6k
views
Batch Correction and Normalization for champ.CNA
bioconductor ChAMP copy number batch effect normalization
updated 8.1 years ago by ▴ 10 • written 8.1 years ago by • 0
0
votes
0
replies
1.2k
views
champ.CNA error (Error in sort(abs(diff(genomdat)))[1:n.keep])
ChAMP champ copy number
8.2 years ago apmishra • 0
2
votes
9
replies
3.1k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR copy number
updated 9.1 years ago by ▴ 170 • written 9.2 years ago by • 0
0
votes
0
replies
1.1k
views
Why are the raw copy numbers maxed at 5 and minned at 0 ?
crlmm copy number
10.0 years ago kforner • 0
7 results • Page 1 of 1
Recent ...
Replies
Answer: WGCNA by ATpoint ★ 4.8k
> I would like to ask whether it would make sense to first normalize the count data using DESeq2 and VST before performing WGCNA. This …
Answer: cannot download atena annotation for human by Robert Castelo ★ 3.4k
Hi, sorry for the delay in getting back to you, probably by now you found the solution yourself, but just in case you didn't or anybody els…
Answer: Comparison of results obtained from a subset of the data versus the complete dat by swbarnes2 ★ 1.4k
In general, using the entire dataset and then just comparing the subgroups you want within the whole dataset is preferable.
Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k
If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…
Answer: PhD scholar by ATpoint ★ 4.8k
Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…
Votes
Answer: Origin of the labels for the SingleCellMultiModal dataset
Answer: PhD scholar
Answer: how to use `arrayWeightsQuick()`?
Answer: how to use `arrayWeightsQuick()`?
Having Trouble Using CNE12() and CNE21() in CNEr
Awards • All
Scholar to ATpoint ★ 4.8k
Popular Question to aguirre ▴ 20
Popular Question to Robert Castelo ★ 3.4k
Scholar to Gordon Smyth 52k
Popular Question to Ariel Chernomoretz ▴ 170
Locations • All
The city by the bay, 1 hour ago
United States, 2 hours ago
WEHI, Melbourne, Australia, 2 hours ago
United States, 3 hours ago
The Netherlands, 4 hours ago
Traffic: 405 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6